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Tanja Woyke
… postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … at Caltech Review (Member of Visiting Committee), NASA Exobiology.  … Volland et al. 2022. A centimeter-long … Biotechnology 35, 725-731. Mukherjee et al. 2017. 1,003 reference genomes of bacterial and archaeal isolates expand …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… of field research sites designed to collect long-term open access ecological data to better understand how U.S. … archives and makes available for research over 100,000 samples and specimens of over 60 different types of NEON … more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: …
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Tracing the Evolution of Shiitake Mushrooms
…   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … in the global  carbon cycle . As decayers, Lentinula fungi access carbon previously locked away in wood, converting it …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to …
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The JGI Data Portal: Improving User Experience
… in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the … processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …
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Uri Neri
… biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he … messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …
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Mindfully Moving JGI
… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … focused on keeping only items that bring joy (and are necessary for JGI’s operations). At the JGI, that translated to sorting through the stuff accumulated in offices, labs, lockers, and other storage …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis … at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and Richard Hayes. …
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The Big Deal About Short Plants
… uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …
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IMG/VR
… of IMG/VR to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on … Energy Joint Genome Institute, or JGI.  Two special days occur in April: the 50th celebration of Earth Day on April … She talked about her  Community Science Project proposal with JGI, in which she’s studying a special kind of …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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