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… Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to … helpfulness and patience of my JGI PIs, having lots of data to play around with.” …

… write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …

… Back in 2011, JGI-supported researchers published a paper in the … . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …

… in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … monitor loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as … pairing proved to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of …

… relied on methods that eschew culturing, painting a more systematic picture through single-cell and metagenomic … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then … of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high …

… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a …

… notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …

… research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, … Brewing, Walnut Creek Where:  Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek Featuring a casual, … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …

… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings to a new 4-story building 20 miles away in another city and county began more than …

… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … complete set of genes needed for hydrogen-dependent and CO2-reducing methanogenesis.  These two things combined led us …