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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, …
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, … the JGI, Dr. Yoshikuni was co-founder and chief science officer at a clean technology startup, Bio Architecture Lab, … is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's areas of focus, major …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of … at the University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, …
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Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States)
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a … proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes … our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also highlight …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab … Wang Project:  Embeddings Based Clustering of Biosynthetic Gene Cluster for Novel Natural Product Discovery Kayla Kelly …
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The Power of One, Amplified
… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome …
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JGI announces 2024 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae … contains expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The … protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from … The Impact The initial analysis highlights abundances of gene annotations that provide insights into the nutrients …
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