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JGI@25: The Little Alga That Could
… and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s … sort of genomic hackathon to annotate a genome. (Hear more from on Chlamy from Sabeeha Merchant in this episode of … The reference genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome …
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Filling in the Plant Tree of Life
… and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Gotta Catch 'Em Gall
… young in structures called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant … Science Program . Proposals from researchers at Concordia University (Canada), University of Michigan, University of …
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Annual Genomics of Energy & Environment Meeting
… the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they are … goals. Keynotes: M. Francesca Cotrufo, Colorado State University N. Louise Glass, UC Berkeley Ian Foster, Argonne …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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The Fungi That Survive In Antarctica
… fungi are microscopic and mighty. They survive everywhere from Antarctica to Joshua Tree National Park, despite … day help other organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are …
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Mike Sneddon
… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … earned his PhD in Computational Biology and Bioinformatics from Yale University. … Arkin, AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature …
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