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The Sequence to Function: Applications and Analysis for the …

A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples … University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, researchers at three DOE Bioenergy … paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of …

By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united … the genomics expertise of three national labs in one long building at Walnut Creek, after countless generations of … shipped to, and then installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of …

… of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA … bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …

Every year, the JGI sequences around 35,000 samples — from plants, algae, …

… in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in plant roots),  …