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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … genes for both pathways had never been observed in a single microbial population until now. Ca.   M. washburnensis was …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. Summary The extreme … comprise 20-50 percent of the iron-oxide microbial mat communities in the 60-80°C temperature range. The discovery …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … generation of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein … environments and grouped those with similar microbial communities together. Those similarities, based on their …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP … functional capabilities of plants, microbes and microbial communities, and understanding of natural environmental …
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The integrated microbial genomes system: an expanding comparative analysis resource
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Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
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Young inversion with multiple linked QTLs under selection in a hybrid zone
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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Prokaryote Program User Advisory Committee
… on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides …
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