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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile original data for …
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Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … SIP allows researchers to go beyond understanding which microbes are present in a sample, to generate data about … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … UEC responsibilities include: Make recommendations to the JGI regarding calls for proposals, including focus …
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … Shotgun metagenomic analysis discovered the presence of integral biomarkers:  mcrA ,  nifH , and  dsrB .  Lastly, …
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Marsarchaeota are an aerobic archaeal lineage abundant in geothermal iron oxide microbial mats
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also … gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant … like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural Greenhouse Gas …
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Integrating Experimentation with Data
… for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint meeting! “Empowering Automated Laboratories: Integrating Experimentation with Data” … of Science national scientific user facilities dedicated to advancing research in bioenergy and environmental …
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Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
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