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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … can carry out. The work on single cells was done in collaboration with scientists Tanja Woyke and Rex Malmstrom at … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI …
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), is of importance to the … ) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation
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Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with …
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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also … gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant … things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural Greenhouse …
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) Joint … at Pacific Northwest National Laboratory and Lawrence Berkeley National Laboratory, respectively. The team’s …
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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