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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the … the strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, …
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Exploring Phages at JGI
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Digging into Microbial Ecosystems Deep Underground
National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
Los Alamos National Lab researchers investigated Chromosome 16, which contains about 3% of the human genome. They wanted … sequence and analysis of duplication-rich human chromosome 16 . Nature. 432, 988–994 (2004). doi:10.1038/nature03187 …
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David Goodstein
… across the plant kingdom. Nucleic acids research 51 (16), 8383-8401. JT Lovell et al., 2022. GENESPACE tracks …
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JGI@25: Studying Sorghum’s Survival Skills
… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain … production, John Mullet (Texas A & M and Great Lakes Bioenergy Research Center) and his team set out to compare … sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC …
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Natural Prodcast Episode 3: The Primer, Part 3
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iPHoP: A Matchmaker for Phages and their Hosts
… these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, … such as terrestrial soil, having additional isolates and metagenomic datasets will strengthen future virus-host …
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JGI@25: Roots of a Mutualist Relationship
… with poplar … Fungal Datasets … Genome Inside: THE Bioenergy Tree …
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Cracking the Secrets of the Diatom’s Shell
… biobased economy. They conduct research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… of stable, synthetic microbial communities to take advantage of their joint metabolisms. Because, together, microbes …
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Ben Bowen
… and Environmental Research user community in their bioenergy and environmental objectives. … BS – University of … … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … in situ kinetic histochemistry. Scientific reports, 3(1), 1656. Rübel, O., Greiner, A., Cholia, S., Louie, K., …
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