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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A call for standardized classification of metagenome projects
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … impacted by the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The …
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Toward a standard in structural genome annotation for prokaryotes
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … Ford (Operations Area Deputy/Berkeley Lab Deputy Chief Operating Officer). “You define the word ‘collegial’” “Every … before the event segued to remarks by the leadership of the DOE Office of Biological and Environmental Research: …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives … Berkeley National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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