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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you … students, we obviously can't put any antibiotics or antifungals in there. So they get just a smattering. JACKIE: …
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Revisiting the sequencing of the first tree genome: Populus trichocarpa
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … that experience was the chance to see what the industrial life was like. And I think I learned that I’m more of an … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge … Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected … furnish greater definition of the roots of the tree of life on Earth, and their broad distribution suggests … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …
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Supercharging SIP in the Fungal Hyphosphere
… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … at a larger scale through downstream DNA purification and sequencing steps. Ultimately, researchers found their …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … and Archaea : Under the umbrella of the GEBA, the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its latest addition — made possible in part …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley Lab team comprised of JGI … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities …
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Open Frameworks Training the Next Generation of Scientists
… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological … provides training and scientific contributions—including sequencing services and analysis—to participants. Over the …
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Selection to sequence: opportunities in fungal genomics
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