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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI … new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the energy-producing … machine learning models that predict biological traits from DNA sequences. The study also confirmed that mitochondrial …
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j5 DNA Assembly Design Automation
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DNA Scanner: a web application for comparing DNA synthesis feasibility, price and turnaround time across vendors
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… to right are: [Above] Sara Branco, Asdrubal Burgos, Posy Busby, Hao Chen, Jay Chen, Maureen Coleman and Hugh Cross; … are engineering next-generation feedstocks through CRISPR-edited poplars with optimized lignin, engineering … new opportunities for biomanufacturing, from industrial enzymes discovered in extreme environments to engineered …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA Synthesis Platform Ben Bowen and Katherine Louie for the …
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Natural Prodcast Episode 15: Katherine Duncan
… people that wants to study oceanography and was fascinated by the oceans, though I’ve always lived by the sea in the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: So Alison, I’m really excited today. We have, by far, I think, one of the most decorated and legendary … 20S proteasome. The proteasome in the cell is a bundle of enzymes that is used to degrade proteins, peptides, that are … We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready to send …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Widespread natural variation of DNA methylation within angiosperms
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On the origin and evolutionary consequences of gene body DNA methylation
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