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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references … of environmental and energy genomics. Click on the images below to learn about the science depicted. The …
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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … Science Program, to use microbiome science to help make plants more resilient to drought. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … roles. The three Chairs are responsible for preparing the agenda of UEC meetings in coordination with the JGI Director …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Ian Blaby
… analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … standards.  A year later, her team used proteomics, genomics and transcriptomics to discover another advantage …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for … If you have any questions, please contact your Project Manager or jgi-project_manage[email protected] . … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … nuclei and spatial transcriptomics data this work leverages.   These experiments focused on two species at once: …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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