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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or isolated strains, … two vectors,” said Sevim.  While there are alignment-free methods for nucleotide searches, such as  Mash and  BBsketch …
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
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Alignathon: a competitive assessment of whole-genome alignment methods
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Reply to: Examining microbe–metabolite correlations by linear methods
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A simple, fast, and accurate method of phylogenomic inference
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MAGI: A Method for Metabolite Annotation and Gene Integration
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CSP Large Scale Call
All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests …
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