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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … Joint Genome Institute, Dr. Kyrpides led the development of the genome analysis and Bioinformatics core at Integrated …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside … structures within cells. This is the largest dataset of its kind ever assembled. The team identified 15 core …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … : Under the umbrella of the GEBA, the JGI is sequencing thousands of bacterial and archaeal genomes from diverse … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Mitochondrial ATP generation is more proteome efficient than glycolysis
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An orphan gene BOOSTER enhances photosynthetic efficiency and plant productivity
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Synthesis
… automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, … Software Engineers in the Synthetic Biology Informatics Group …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … Wales (UNSW)-Sydney professor Rick Cavicchioli compared two strains of haloarchaea from different Antarctic lakes. To …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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Host genotype controls ecological change in the leaf fungal microbiome
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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