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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two … a large TPS gene family is well-conserved across eucalypts. Improved knowledge of the evolution and selection of this …
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Webinar: PhycoCosm Tutorial
… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … again how did you pick genomes to be on the genomes portal? For the taxa I work on, there are 7 genomes on NCBI but your … produced data automatically assembled and run through your annotation pipeline then added to PhycoCosm (if relevant)? …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Improved Gene Annotation of the Fungal Wheat Pathogen Zymoseptoria tritici Based on Combined Iso-Seq and RNA-Seq Evidence.
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … our database of mappings between biochemical reactions and annotations. We look at what was annotated in the genome and …
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Toward a standard in structural genome annotation for prokaryotes
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … Genome Project (HGP), and building upon the principles for open access in the field of genomics established in  … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …
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A roadmap for equitable reuse of public microbiome data
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