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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two … a postdoc and went to industry to see what they had, what data they had. DAN UDWARY: And they had a lot of data for … of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” … DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, …
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” … ALISON: It sounds like it’s kind of like our endocrine system or hormones in a way too. Like in a maybe analogous … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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IMG ER: a system for microbial genome annotation expert review and curation
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of … the the Lawrence Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area is funded by the U.S. …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science … provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global … in studies of complex biological and environmental systems. We optimize our service to the community through …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues … so starting from some of the enzymes that we had the most data on and knew the most about, working with my … In this episode, Dan and Jackie talk to Alison Narayan , from the University of Michigan’s Life Sciences Institute and …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, … but it also requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic … on the JGI’s Integrated Microbial Genomes & Microbiomes ( IMG/M ) portal. As part of a comparative analysis, 824 new … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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