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101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years … diverse than their Pacific Ocean ancestors — meaning these habitats are more vulnerable to the effects of a changing … This study was supported by a PhD scholarship from the China …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The … psychrophila can thrive in changing conditions. A recent study shows that when salinity is reduced in its … and nutrient-poor conditions. It lives in a range of habitats — from brine pockets and melt pools, and within the …
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … gene cluster data set through the JGI's Secondary Metabolite Collaboratory . In addition to the datasets generated … we want the model to generalize to any genome from any habitat,” Wang said.  Training a model of this scale with 4 …
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Cas9-Based Metabolic Engineering of Issatchenkia orientalis for Enhanced Utilization of Cellulosic Hydrolysates
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The environment drives microbial trait variability in aquatic habitats
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Catalog . Published in the October issue of Nature, the study highlights the vast functional diversity of microbes …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … 2.  Q(uestion): Do you publish the data sets the trees are based upon? A: This is still work in progress as new genomes … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … Impact This dataset gives researchers a new foundation for studying how fungi produce and manage energy at the cellular …
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of … data and expertise to the global research community to study complex biological and environmental systems. The … studies enabled contribute to the development of bio-based products and next-generation technologies, and toward …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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