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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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Cultivating the Bacterial Microbiota of Populus Roots
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Genome sequence of Dysgonomonas hofstadii DSM 104969T isolated from a human abdominal surgical wound
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis … wild Miscanthus lineages to better understand the genetic diversity of the grass, which could help in optimizing …
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From Competition to Cooperation
… species, such as nutrient transporters, were co-opted into symbiotic functions. Recently published in  Nature … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …
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A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments
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Biodesign
… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing … platform enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA …
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Soil virus offers insight into maintaining microorganisms
… health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one host … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, … X-rays.  This study only begins to unearth the insights to be found within soil viruses and AMGs. It could …
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Power in isolation: insights from single cells
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How to Submit Sequencing Samples
… of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 …
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Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome
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