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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … This work was supported by the Energy Biosciences Institute and the DOE …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Protein structure determination using metagenome sequence data
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Hi-C metagenome sequencing reveals soil phage–host interactions
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … The DNA Synthesis Program plays a central role in advancing …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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