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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We …
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JGI Advisory Committees Code of Conduct
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the … on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As …
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A One-Stop Shop for Analyzing Algal Genomes
Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …
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Strain Engineering
… yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an additional phase … a taxonomically diverse suite of microbial chassis strains for elevated opportunity for expression. Research Team    … …
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Microbial Genomics & Metagenomics (MGM) Workshop
… familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a …
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … genome for  M. sinensis,  and the associated genomic tools, allows  Miscanthus to both inform and benefit from …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING …
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Nigel Mouncey
… genetics that started with his education and carried forward into his roles as a senior research scientist at … … Jensen, R. O. et al. 2024. Phylogenomics and genetic analysis of solvent-producing Clostridium species. … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from …
Learn more
Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls to the U.S. … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …
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