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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … data, which limits the ability of researchers to accurately perform functional assessment, host prediction, and …
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Whole genome sequence of the denitrifying thermophile Geobacillus thermodenitrificans subsp. calidus DSM 22629T
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is so … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… gene clusters for novel secondary metabolites for multiple applications The planet’s microbial diversity is … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Ben Bowen
… and data integration. Dr. Bowen’s expertise in spectral alignment, molecular networking, chemoinformatics, and … bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … Google Scholar. … Education … Awards and Honors … Selected Publications …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … of the genome sequence also provides insights into how the multiple chromosomes of  Miscanthus arose by ancient … The generation of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core …
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … regions of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Structure, function and diversity of the healthy human microbiome
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A thermostable Cas9 with increased lifetime in human plasma
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Virus-associated organosulfur metabolism in human and environmental systems
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