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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project … How To Create an Annotated GenBank File There are several easy-to-use …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing … hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … (LDRD). The work conducted by the U.S. Department of Energy (DOE) Joint Genome Institute ( …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … Filling in the Plant Tree of Life … Fungal Dataset … Plant Datasets …
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Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild … viridis), a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 pathway, … say, ‘Yeah, there are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … Please review our FAQ in advance of contacting the PMO office.  … start on any approved proposal – including the submission of samples for sequencing, or the submission of sequencing …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community … synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … for technical help, feedback or a guided walk-through of the new Data Portal.  …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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