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Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled … fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … The work conducted by the U.S. Department of Energy Joint Genome Institute …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … organisms have developed metabolisms that function with a toolkit of enzymes. It’s useful to differentiate these …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … umbrella of the GEBA, the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! … highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 … team that  released a reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis in  …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their …
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Novel bacterial clade reveals origin of form I Rubisco
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … techniques and data analyses compile original data for improving fungal genomic resources empower students … Beyond providing a scalable solution for production of high-quality fungal …
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