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JGI@25: The Little Alga That Could
… a unique place in evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of … Plant Datasets …
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Partnerships: Myco-Ed
… into undergraduate teaching laboratories with minimal overhead (cost of media, ITS sequencing and … and to reduce teaching-lab costs, we have partnered with the Arizona Genomics Institute where high molecular … datasets encompassing a wide array of fungal genomes, along with curated metadata to enable comprehensive comparative …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to … You don’t have tunnel vision anymore, only seeing the microbes you can grow in the lab — suddenly you see …
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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , … Proposals whose scope was not previously negotiated with the JGI will only be accepted pending available capacity, technical review and scope negotiation with the JGI.  Investigators with grants funded by DOE-BER …
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Phylometagenomics of cycad coralloid roots reveals shared symbiotic signals.
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by … of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And … eventually, their findings could help us grow better crops, with less impact on our planet. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha …
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Silver age of GOLD introduces new features
… the appropriate contextual information, or metadata, stored with them. GOLD provides manually curated metadata resources … publication. Information is also obtained and cross-checked with public resources including NCBI Taxonomy and various … and capabilities. The most recent improvements include new features like a public API and ecosystem landing page, as …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are … also known as “polyploidy,” is common among flowering plants; at least once during their evolution, the genomes of …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida business producing bio-based plant nutrition products that target soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome …
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