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Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … present on their work. BER Plant Genomic Science Workshop Agenda: 6:20 PM Overview and Joint Genome Institute Plant …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to … publicly available on JGI data platforms, generated from past studies conducted by JGI users. These datasets include …
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Brachypodium: A monocot grass model system for plant biology
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Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes
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CRAGE-CRISPR facilitates rapid activation of secondary metabolite biosynthetic gene clusters in bacteria
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics … invaluable information on virus diversity and activity in microbial communities, however they can only provide a …
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Jeremy Schmutz
… from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more …
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Mining Metagenomes for Cas Proteins
… was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … molecules broadens the range of applications for CRISPR-Cas systems. It also underscores the untapped potential waiting … accessible metagenomic datasets from a wide variety of ecosystems around the world, conducting iterative searches …
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Partnerships: Myco-Ed
… The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the … scalable computing infrastructure to perform sophisticated systems biology analyses. The platform is a freely available …
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Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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