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A Plant Root Atlas for Tracking Developmental Trajectories
… 100,000 single root cells and combining the information with previously published datasets. The work was  recently … Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell Solutions for Energy and the … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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2024 Progress Report
April 2024 — through serving an increased number of users with a record output of products, making data easier to … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … 11% of the five-year milestones. … Highlights arising from scientific collaborations with our users over the last year …
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JGI@25: From Life at the Extremes to Editing Genomes
National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … al. A thermostable Cas9 with increased lifetime in human plasma. Nat Commun. 2017 Nov 10;8(1):1424. doi: …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the … term efforts to contribute towards a diverse workforce and scientific community (working with the JGI) as well as our … final presentations and beyond. Before breaking for the poster session of the 2023 intern cohort, representative …
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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology … Scholar … LBNL Director’s Award for Exceptional Early Scientific Career Achievement, 2020 NIH Early Career … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with the National Nuclear Security Administration to … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Natural Prodcast Episode 2: The Primer, Part 2
… 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a … conversation between myself and Alison, and we continue with the basic ideas of the science of natural products, and … of those pathways come from bacteria that actually live within, say, the sponges or other things. And we know lots …
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Plant Program
With collaborative user projects, the JGI’s Plant Program … role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. … to experimental manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… of secondary metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our … at the time and had some really tedious technical problems with editing the recording. But I recently changed the audio … and I hope you’ll enjoy it too. So here we go– episode 13 with Paco Barona-Goméz. DAN UDWARY: Hey Alison. ALISON …
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Axel Visel
… provides direction, leadership, and oversight for all JGI scientific programs. The Deputy of Science is also … Director’s Award for Exceptional Achievement in Diversity 2014 LBNL Director’s Award for Exceptional Achievement 2009 … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… at the University of California, Merced. Woyke received a 2014 Berkeley Lab Director’s Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women … JGI scientist to receive the van Niel Prize; the 2011-2014 van Niel Prize was awarded to Nikos Kyrpides. …
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