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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Natural Prodcast Episode 21: Elizabeth Parkinson
… in is actually seeing whether we could go into the genomes and predict what the natural product might actually … specifically looking at non-ribosomal peptides, looking in genomes for ones that are cyclic. And so we do this-- we've …
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The minimum information about a genome sequence (MIGS) specification
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Kanwar Singh
… their single cell samples using our high throughput pipeline. He also explores new methods for creating …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude … samples,” said Reddy. Kaushal also reviewed and assigned NCBI taxonomy name and IDs for nearly 20,000 public/private …
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Natural Prodcast Episode 2: The Primer, Part 2
… and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …
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Crowdsourcing and curation: perspectives from biology and natural language processing
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome … of multiple forest systems, this work sets up protocols and pipelines that other teams can use around the world. These …
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IMG/M: integrated genome and metagenome comparative data analysis system
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Natural Prodcast Episode 5: Brad Moore
Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … like, you know, at that time, there are only two sequenced genomes of a Streptomyces , or gram-positive high GC … a year or two ago, with the possibility of doing 10 seaweed genomes . At that time, I believe there were probably only a …
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Natural Prodcast Episode 22: Alison Narayan
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Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities
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