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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … microbes assimilating labeled compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom … out through the roots, into the soil, and then picked up by the rhizosphere, then that takes a little bit longer.  …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes … The process is a division of labor by these bacterial groups. But why the strain variability? The authors think the …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the … Genomics Program since 2009 and heads the Single Cells group . Woyke also holds appointments as Adjunct Scientist at … Adjunct Professor at the University of California, Merced. Woyke received a 2014 Berkeley Lab Director’s Award …
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JGI User Executive Committee Expands
… of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of Wisconsin, Maggie Sogin of the University of California, Merced, and Kevin Solomon of the University of Delaware. … at the Donald Danforth Plant Science Center, where his group focuses on interactions underlying plant adaptation in …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … by electricity anytime soon,” Stacey said when we caught up with him recently. “So, there’s going to be a need for … Plant Datasets … Fungal Datasets …
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Data Policy & Support
… more about our data management practices and the resources we provide. … Data Management at the JGI … JGI Scientist Code of Conduct …
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What Happens To a Rainforest When You Dial Up Drought?
… of the atmosphere. This episode, researchers take a look at what happens to that storage when a rainforest hits a drought. Tag along with their experiments in a fully enclosed, human-made …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations Deputy has come to a close as this … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … he was pleasantly surprised to see how well the management skills he had learned during his Navy career and in private …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their … 5,000 times the average size. Woyke’s  Single Cells Group helped better-understand what the sulfur-oxidizing, … initially using it to comb through more than 5,000 data sets and thereby increasing RNA virus diversity five-fold.  …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … to library research for three months. While reading up on photosynthesis, she stumbled upon an interesting … Algal Datasets … Plant Datasets …
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Network Modeling of Complex Data Sets
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