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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … deciphering the complex wiring behind a city’s power grid. Just as the flow of electricity controls when and where … are falling. As  published online in  Nature Plants  on July 15, researchers have developed multiplexed assays — …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … warm, arid environments. Corn and sugarcane are among the major high-yield C4 crops, as are the candidate biofuel … for Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … across this plant in one accessible resource,” said John Lovell, a Research Faculty Investigator at the … we know little about.  Researchers from Colorado State University, DIRAD, Clemson University, University of …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … Brenda Yu Class Year: 1st year graduate student at Stanford University in the Biophysics program. (Graduated from UC …
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JGI Accepts 17 Proposals for Community Science Program
… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Andrew Nelson of the Boyce Thompson Institute at Cornell University seeks to understand and enhance the rubber …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … is led by a consortium involving researchers from the University of California (UC), Berkeley, UC Agriculture and … National Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and … A team led by Michelle O’Malley, a chemical engineer at the University of California (UC), Santa Barbara, collected the …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic … previously developed combined approach, researchers at the University of California, Berkeley and the Joint Genome …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … de Aula Dei (EEAD-CSIC) (Spain); Fundación ARAID (Spain); University of California, Berkeley; Gregor Mendel Institute …
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JGI at the AGU Fall Meeting
… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu (lightning talk): “Wetland Restoration … and Reduces N2O Production Potential in Sacramento-San Joaquin Delta, California” December 14 8:05am Convention …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide …
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