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A Grass Model to Help Improve Giant Miscanthus
… (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … (BER), grant nos. DE-SC0006634 and DE- SC0012379. The generation of the tetraploid M. sacchariflorus whole genome …
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Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis
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DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
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Combinatorial Regulation of Endothelial Gene Expression by Ets and Forkhead Transcription Factors
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Tuning of Gene Expression in Clostridium phytofermentans Using Synthetic Promoters and CRISPRi
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also … gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down … microbial methane-makers. Eventually, that could help us dial back their emissions, while still producing things like …
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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A Collaboration to Improve Plant Genome Annotations Across Species
… led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with understanding gene …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … guest piece, postdoctoral researcher Joseph Napier from the Juenger lab and computational biologist Paul … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
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