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JGI User Executive Committee Expands
… $50 million in annual research and don’t award at least 70 research doctorates a year. Coinciding with the election results, Roland … been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members …
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Tanja Woyke
… metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell … Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding agencies, …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, … with each intern’s interests or educational goals.  This year’s internship program was remote in its entirety due to … of our work,” said Nigel Mouncey, JGI Director. “This year is unlike any other year, but we’ve had another …
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Axel Visel
… served as JGI Interim Director from March 2016 – March 2017.   … Axel Visel is the JGI's Deputy for Science Programs. … of lipid metabolism in microalgae .  Nature Plants 1: 15107 Lupiáñez DG, Kraft K, Heinrich V, Krawitz P, Brancati F, … genes and genomes from cow rumen . Science 331, 463-7. Visel A , Zhu Y, May D, Afzal V, Gong E, Attanasio C, …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and finished … JGI’s single cell genomics capabilities to assemble, identify, and characterize more than 200 microbial genomes that … microbial lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… may be akin to finding a single snowflake on a colored-in page of that book. Published online September 28, 2022, in … work resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the … viruses is just the beginning. “I often say that just identifying a sequence as viral is not even half the story.” Neri …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja … “Being a JGI-UC Merced Intern during the summer of my first year as a Ph.D. student significantly, and positively, …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, … using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses … … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed under …
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Products
Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size … vector of choice Glycerol stock of sequence verified clone 170/NA DNA Synthesis Constructs >10kb in size Gene clusters …
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Emiley Eloe-Fadrosh
… from host-associated and environmental samples to identify and characterize genomic information from uncultivated … She stepped into the Metagenome Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome … science. Rev. Microbiol. 18:313-314. Roux S, et al. 2019. Cryptic inoviruses are pervasive in bacteria and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Control of Drought Response in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of … of the National Academy of Science the week of December 2, 2019. While sorghum is drought-tolerant, the crop’s precise … datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to drought …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… distinguish males and females even when plants with multi-year generation times are young and haven’t physically … Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key Project …
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