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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two … hampered by the crop’s highly polyploid genome, which makes sequencing and assembly of the genome extremely challenging. …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …
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Dispatches From JGI Interns
… hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an effort to create …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you … at the college level. So-- DAN: Yeah, for sure. And JGI is sequencing quite a few of the things that end up-- BETSY …
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Virus Discoveries that Keep Getting Bigger
… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … to provide a perspective on giant virus diversity, and how sequencing and bioinformatics have sped up the study of … single cell methods — involving flow cytometry and sequencing of single viruses or single host cells harboring …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic … environment. Summary Dewar Creek is a remote hot spring, deep within the British Columbia backcountry (Purcell …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” …
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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