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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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FICUS-NERSC/KBASE
… basis, in accordance with JGI’s data release policy.  Interactions with applicants and others who might be … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …
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Lignin‐modifying processes in the rhizosphere of arid land grasses
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A Recommendation for Naming Transcription Factor Proteins in the Grasses
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Kjiersten Fagnan
Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan was part of the Gordon Bell prize winning … Opioid Epidemic: Determining the Epistatic and Pleiotropic Genetic Architectures for Chronic Pain and Opioid …
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Making a Lichen Together
… two main branches of fungi); another is a photosynthetic microbe, tucked in the fungus’ tissue. If you’re a Marvel … and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, … of the results were unexpected. For example, lichenologists generally anticipated that in this symbiosis going back …
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Gone with a trace: cataloguing the disappearing gut microbes
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass … off. And that’s in a single lifetime, right? Or maybe two generations. And so, you know, and the real question is, can …
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Corals in Hot Water Get Help From Their Microbes
When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel … in breeding efforts, and also because 8X switchgrass is generally thought to harbor less genetic and phenotypic …
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Genome sequencing and analysis of the model grass Brachypodium distachyon
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