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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences … a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … the proposal process. How do we know who is the person to contact? A:  Contacts are listed on the proposal call page. …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI … Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … feasibility first. Prospective users are always welcome to contact one of us about possible proposals if it’s different …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… and applying these engineered ecosystems across various biological contexts. The program fosters intimate, … standardized fabricated ecosystems for microbiome research. Contact If you have questions or would like access to the … which has channels for finding roommates and carpools, contact Margie Lozano ( [email protected] ) …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial … the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the … that the virus is not rapidly replicating, but instead may be abiding in the host genome: the strategy of lysogeny. …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful … to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) …
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Len Pennacchio
Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation Platforms … Director’s Award for Exceptional Scientific Achievement 2017-  Adjunct Professor UC-Berkeley 2015-  Co-Chair, …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and … and machine learning to find novel functions that may impact microbiome structure and biogeochemical cycles. … (MIUViG). Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …
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The JGI Data Portal: Improving User Experience
… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … — they’ll help us build a solid knowledge base that may inform future updates to one (or more) of the JGI … volunteering to participate in a user research session by contacting the JGI User Experience Group — once you complete …
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JGI@25: Strengthening Soybean
… of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the first legume species with a published … the JGI has also helped researchers understand a fungus that threatens these crops as they grow. Asian Soybean Rust is a major problem. Leaves grow discolored and rust …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the … to more sustainable energy production.  However, less than 10% of the microbes found in any environment can be grown in …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … for sequences of RNA viruses in large data sets, their work may be akin to finding a single snowflake on a colored-in … resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the …
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