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Data Ecosystem
… exploration, granting access to diverse datasets that deepen our understanding of how organisms interact with each … access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level …
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JGI Portals
… critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … metagenomes, and metatranscriptomes. It features over 15 million viral genomes and fragments, enriched with …
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High level of intergenera gene exchange shapes the evolution of haloarchaea in an isolated Antarctic lake
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass … think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, …
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Complete genome sequence of the plant-associated Serratia plymuthica strain AS13
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science … how life thrives in the Arctic, and how different types of microbes form communities. As temperatures fluctuate, salt … express genes involved in freezing resistance, adapting to cold temperatures and tolerating the changing salinity of …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded … as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world … with genomic DNA samples from Ruminococcus flavefaciens (XPD3002). With that sample, the Salk Institute team was able to …
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Fishing for Novel Cellulose Degraders
… Lab). Using a single-cell screen, they can now identify microbes with specific functional characteristics. When they … bacterium typically found in low abundances. The Impact Microbes are known to be key contributors to the planet’s … and unknown. The challenge remains to learn more about what microbes are present in any given ecosystem—particularly …
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CSP Functional Genomics
… and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and track record of the applicant.  Learn about the general review process or find details on the internal … For general questions, please reach out to Christa Pennacchio, …
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