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The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental …

… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project …

With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant …

Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …

Uncovering associations between plant roots and fungi that can help or harm … plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups …

Database provides details on river microbes in 90% of US continental watersheds. The … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

Congratulations to Jane Grimwood, who has been appointed the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited …

To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

In honor of the JGI's 25th anniversary in 2022, we have … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …