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… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National … that have been separated for millions of years. The study highlights the genes that could be used to make other fungal …

… our collaborations and capabilities to enable great science that will help solve energy and environmental … with support of the US Department of Energy Office of Science, as well as from the US Department of Agriculture … University, was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …

… to do manual annotation – not covered in these tutorials 6.  Q: On the genome synteny page, would it be possible to add a feature to look for … project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …

… Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … and as an Adjunct Professor at the School of Natural Sciences at the University of California, Merced. Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …

… quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on the genetic makeup of new giant viruses. This review highlights four of these approaches. One way of detecting …

… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: … episodes where Alison [Takemura] and I chatted about science. This episode is our conversation with Nancy Keller, … do you check if they’re there? Like we always talk about 16S for bacteria, but we don’t talk about it so easily with …

… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of … that simulated summer in Arizona. Scenedesmus  sp. NREL 46B-D3, which thrives both in saltwater and wastewater, was … of biofuels sourced from algae. The collaborative approach highlights how the pipeline could help researchers …

… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within … metagenomes (within IMG).  The Impact The initial analysis highlights abundances of gene annotations that provide … was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the 12,063 …

… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … that live there.  A  Communications Biology article highlights how one microalga collected from water on the ice … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …