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Sequencing Technologies

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation … with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to users. … …

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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria

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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data

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Proteome profile of the endomembrane of developing coleoptiles from switchgrass (Panicum virgatum)

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Extensive Genetic Diversity is Present within North American Switchgrass Germplasm

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Special Initiatives & Programs

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … and Environment (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner … of genome data, assistance in interpreting and/or building on an existing data set, or the refining of new …

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Building on basic metagenomics with complementary technologies

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efam: an expanded, metaproteome-supported HMM profile database of viral protein families.

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The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database

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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes

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ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes

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CSP Large Scale Call