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Advances on genomics, biology, ecology and evolution of Brachypodium, a bridging model grass system for cereals and biofuel grasses
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The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum
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Salt tolerance of two perennial grass Brachypodium sylvaticum accessions
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Jeremy Schmutz
… involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. Genome sequencing and analysis of …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … of bitter fruit, yet sweet are its genetic secrets. This work builds upon JGI-supported research led by Gmitter and …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, … who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life …
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CalTeach
… deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting … diversity, equity, and inclusion, with concurrent field work in local classrooms and tutoring centers. Cal Teach …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … natural products you’ll get a good sense of what it’s like working with him.  We talk about his father, the legendary …
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Brachypodium: 20 years as a grass biology model system; the way forward?
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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Mining Metagenomes for Cas Proteins
… possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) … them to, or protects them from, disease. Much of the work on genome editing has focused on the seminal …
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