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Natural Prodcast Episode 20: Brian Bachmann
… in and around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using …
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Partnerships: Myco-Ed
… or dedicated compute infrastructure is required to perform computational analyses. The Mycocosm user interface is … easily adapted by instructors training their students in computational biology and microbiology topics.  Learn more …
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Natural Prodcast Episode 14: Nigel Mouncey
… we’re doing. And using these together along with all of our computational tools to really build out much more of an … the products coming from these clusters. And then our computational work to link all this together and try to … at JGI. And we have two arms to the group. One is the computational work that Dan and our new hire, Drew Doering …
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Examining the Relationship Between the Testate Amoeba Hyalosphenia papilio (Arcellinida, Amoebozoa) and its Associated Intracellular Microalgae Using Molecular and Microscopic Methods
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Leo Baumgart
… and bioinformatics pipelines to transition bench-scale methods into production workflows. He developed and scaled … His team is also developing single-nuclei sequencing methods to characterize gene regulation at the level of … and plasticity in bacterial gene regulation." Nature methods 18, no. 12 (2021): 1499-1505. Hasty, Jeff, Leo …
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Frequently Asked Questions: Project Management
… IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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Prokaryote Program User Advisory Committee
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial … there has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have … protein families with completely novel structures. The computational power to perform this level of analysis hinged …
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Metagenomics
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Programs & Platform Leads
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