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A Plant Root Atlas for Tracking Developmental Trajectories
… single root cells and combining the information with previously published datasets. The work was  recently published in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … that your request is appropriate for that call. Learn more about the  average base outputs for each product. For custom requests not on this list, or to discuss experimental … clone 170/NA DNA Synthesis Constructs >10kb in size Gene clusters or pathways totaling more than 10kb in length …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive … and track record of the applicant.  Learn about the general review process or get details on the …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … The JGI uniquely offers the first quantitative Stable Isotope … microbiome activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of … it yourself  here .) She translated her abstract from a 2019 conference. Both versions appear side-by-side below: …
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Tour the IGB
… of each floor, click and drag to look around the space, use the graphic rings to move about the space, and your pointing device to zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of …
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Natural Prodcast
… Natural Prodcast is a “fireside chat”-style podcast about natural products and the science and scientists of … to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … community. Host Dan Udwary talks to luminaries in the field about current and future developments, and how the JGI can …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding solutions to clean energy and … Members from across Berkeley Lab gathered to learn more about planting and tending these shoots of their own. The …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing … genomic potential into practical applications, including sustainable biofuels, biomaterials, natural products, and … biodegradation and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in …
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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