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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been … data. These instructors teach microbiome science with collaboration and peer-support through regional cohorts and …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day … and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The … of environments, including plants, soil, and the gut. To better understand the dynamics of this molecule, … microbes, these biosensors may eventually lead to ways to improve cellulose-based biofuel synthesis. Additionally, it …
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii … The work conducted by the US Department of Energy Joint Genome Institute is supported by the …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … Episode Transcript … This the second episode of Natural Prodcast, which continues a conversation from the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities … by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … all with the goals of better data reporting, improved collaboration, and more comparable analysis. A Data Standard …
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Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants
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Conservation of Endophyte Bacterial Community Structure Across Two Panicum Grass Species
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