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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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How Filamentous Fungi Sense Food
Laboratory under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of … information,” Ul-Hasan noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … experiment in the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and …
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When “The Blob” Made It Hotter Under the Water
… such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third … which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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The JGI announces 2024 awardees for our Community Science Program annual call
… excited to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting to … calls, here on our website . See below for the full list of 2024 CSP Annual Call awardees. …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her …
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Scaling Up Existing Skill Sets
… to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in Quantitative and Systems … the Biophysics program. (Graduated from UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the …
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Streamlining Regulon Identification in Bacteria
… efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated … That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …
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JGI Announces 2025 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … microbial sciences field. Roux will be recognized at the 2025 ASM Microbe Meeting in Los Angeles, Calif.  Roux is …
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