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… through their long standing internship program. In just two months, the students participated in networking workshops, data carpentry hackathons, and also made … Juan C. Villada Project: “ Investigating metabolic network of symbiosis using genome-scale metabolic models ” …

… about their experiences at the JGI.) Igor Grigoriev hosted two JGI Engagement Webinars promoting the JGI fungal data …

… genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to make inferences about the biogeographic … copies of the MCP were identified in the metagenomic data, two-thirds of which could be assigned to viral lineages, and …

Institute! This is the first science Nobel awarded to two women, with Charpentier and Doudna bringing the total … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb …

… at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are virus fragments called spacers, that indicate …

… under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … of metagenome-assembled genomes (MAGs) directly from sequenced environmental samples without needing to cultivate … – that’s pretty remarkable.” Adding Value Beyond Genome Sequences Much of the data had been generated from …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a high-quality …

RIViT-seq expand the known transcriptional regulatory network in bacteria, enabling the discovery of regulatory … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. … the number of factor-gene pairs almost doubling to 399. Two of the 11 sigma factors addressed in the study were …

Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …

Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

… values which are integral to what I do on a daily basis. Two of the most relevant are service and respect, and I live …