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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … Kuo, O’Donnell & Volk) to successfully fruit in common farmland soils. Compared to the contingent fruiting in the … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome …
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Training the Next Generation of Talent
… Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate student in the Quantitative … weeks at the DOE JGI, Olmstead saw a few familiar faces, one of them belonged to his research adviser Axel Visel. …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from … Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of three … .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database can be like combing for the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) and the Laboratory for … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to make inferences about the biogeographic …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the … Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many JGIers work to connect those …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …
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The Expanding Universe of Methane Metabolisms in Archaea
… Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role in determining the composition of the Earth’s atmosphere and regulating the global … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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When “The Blob” Made It Hotter Under the Water
… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … ocean known as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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Tracking the Origins of Methane-Producing Microbes
… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … therefore play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to a sustainable bioeconomy, including, …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … labeled compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom provided background on the …
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