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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … Center, Sundy Maurice of the University of Oslo, Aaron Robinson of Los Alamos National Laboratory, Rebecca Smith … and capabilities that affect users. Robinson is a staff scientist at Los Alamos National Laboratory. With a …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … to view the full roster of members. Couvilion is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy …
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Ian Blaby
Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … with a view to developing a deeper understanding of sequence-based gene function. … B.Sc. (HONS) – University of … tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes. …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with … is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live …
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JGI Launches Latest Strategic Plan
Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome …
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