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Training the Next Generation of Talent
… DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … talent pool. At the same time, this program expands and enriches the QSB program but giving students the opportunity … could be considered.” Olmstead’s project focused on the genetic mechanisms of chemotaxis in the Arabidopsis …
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Better Crops With a Pointillist Approach to Plant Genomics
… using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and …
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Cracking the Secrets of the Diatom’s Shell
… Diatoms, a group of tiny algae, are also known as “living opals” because of the strange, beautiful properties of their silica shells. But what genes are responsible for such mesmerizing exteriors? …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, this was the largest turnout for … to ensure projects progressed despite the challenges of remote work. In addition to the knowledge gained on the …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, … traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass … off. And that’s in a single lifetime, right? Or maybe two generations. And so, you know, and the real question is, can …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to … user bottlenecks in access, analysis and sharing of JGI-generated data. She is also interested in reaching and …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also … structure and functionality on the atomic level, was generated at JBEI and analyzed by the GLBRC. By providing …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … organisms and ecosystems. Scientists are engineering next-generation feedstocks through CRISPR-edited poplars with … projects at their word, the research consortium aims to generate over a terabase of sequence. “We are thrilled to …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the … identification of several transcription factor regulating genes and enzymes that can modify composition of algal …
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