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Recombination and insertion events involving the botulinum neurotoxin complex genes in Clostridium botulinum types A, B, E and F and Clostridium butyricumtype E strains

Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes

Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding

A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy.

The Escherichia coli MFS-type transporter genes yhjE, ydiM, and yfcJ are required to produce an active bo3 quinol oxidase

Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression

Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria

Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities

Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants

Soil virus offers insight into maintaining microorganisms

… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … reservoir of genetic diversity and capable of transferring genes from one host microbe to another, which can have a … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental …

JGI@25: Cow Rumen and the Early Days of Metagenomics

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of … environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their potential …

Simon Roux

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … tools to identify virus sequences, the design of new experimental approaches to link viruses to their … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades of …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.