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High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1T Isolated from Great Boiling Spring, Nevada
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human … and downs, challenges and triumphs, and a lot of hard work along the way. In this historical perspective of the Human … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … the lab of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome Program head Tanja Woyke of the U.S. …
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Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation
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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of the Joint Genome … worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory … for election to the UEC. Members serve three-year terms, or longer if they serve in chair positions, and can serve no …
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Simulation of Deepwater Horizon oil plume reveals substrate specialization within a complex community of hydrocarbon degraders
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Access to Rock Star Scientists
… Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … that showcase our collaborations and capabilities to enable great science that will help solve energy and … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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JGI & KBase at PAG XXVII
… Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from … Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science …
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